CDS

Accession Number TCMCG065C11911
gbkey CDS
Protein Id XP_004962666.1
Location complement(join(40319247..40319265,40319459..40319745,40320538..40320624,40320716..40320811,40321880..40321981,40322106..40322148,40322225..40322343,40322947..40323043,40325463..40325524,40325689..40325751,40326622..40326724,40327086..40327181,40327368..40327516,40327642..40327815,40328195..40328273,40328990..40329096,40329175..40329243,40330686..40330859,40331057..40331503))
Gene LOC101760666
GeneID 101760666
Organism Setaria italica

Protein

Length 790aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA207554
db_source XM_004962609.4
Definition DEAD-box ATP-dependent RNA helicase 28 [Setaria italica]

EGGNOG-MAPPER Annotation

COG_category A
Description Belongs to the DEAD box helicase family
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13181        [VIEW IN KEGG]
EC 3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010501        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGACCCCAGCTTCCGGTTCGACCCGGACGGCTCCGACGACGAGGCCGCGGCGGCCCCCTCCGCGCGGCGCAAGGCCGCGGCGCAGTCGCCGTGGGAGTTCTCGTCCTACGCGGAGTCCGTGGCGGCGGAGCACGCGCGCCGCCGCACCACTTCCATCGACGAGAAGATCTCGCAGCTGCGACAGGGCCGCGCGAAGCCCGTCCTCTCCGATGACTCCGAGAGCGGGAGCGGGGAGGACGATAGCGATGAGGAAGAGGTGGAGGGGGAGAGCGGGGATGAGGAGGACGAGCTGGAGGAGAGCGAGGACGAGGAGGAGGAGGTAGAGGGGAGCGGCGATGAGGTGGAGGAGGAGGTCGAGGGGAGCGACGAGGAGGAGGGCGGCGAGGTTGAGGGGGAGGAAGAAGGAAACGAGCAGGGAGAAGAGGAAGAGGAGGGTGCCCATGAGGAAGAAGATACGGCCGAGCAGGATGGTGCAACTGGCACTGTGGATCCTTCTAAATTTTTTGCTTCTTCGGAGGGAGCATCATTCCATGCAAATTCGTTCCTTGAGCTCAACTTGTCCCGCCCACTAGTCCGAGCTTGCGAAGCACTTGGCTACCAGAAACCAACTCCGATTCAGGCTGCTTGCATACCTTTGGCATTAACTGGAAGGGACATATGTGGTAGTGCTATAACAGGATCTGGAAAGACAGCTGCTTTCTCTTTACCTGTGCTGGAACGTCTACTTTTCCGACCAAAGCGTGTACCTGCAATTAGGGTGCTTATTCTTACTCCTACCAGAGAGTTGGCTGCTCAGGTCCATAGTATGATCGAGAAGTTGGCCCAGTTTACTGATATTAGATGTTGTCTCATTGTTGGAGGACTTTCATCTAAGATTCAAGAGGTAGCTCTAAGGTCAATGCCTGACATCGTTGTAGCAACTCCTGGGCGTATAATAGATCATGTACGCAATTCTCTCTCTGTTGGGCTTGAAGATCTAGCTGTTGTGATCCTTGACGAGGCTGACCGTTTGCTAGAACTGGGTTTCAGTGCTGAAATACAAGAACTGATTCGCATGTGTCCTAAAAGGAGGCAGACTATGCTTTTTTCTGCTACAATGACAGAAGAAATTGATGAACTTGTAAAACTTTCACTAAACAAGCCTGTCCGTCTTGAAGCTGATCCTTCTCTGAAACGGCCTGCAACGTTGACTGAAGAGTTTGTAAGAATACGACGAGCACGCGAATCAAATCAAGAAGCTGTTCTACTTGCACTCTGTTTGAAGACTTTCAAGCAAAGTGTTATCATCTTTAGTGGGACAAAGCTATCTGCACACAGGCTAAAAATAATATTTGGTCTCAATGGCATGAAAGCTGCTGAACTTCATGGCAACCTTACACAGGCCCAGCGACTTGAGGCTTTGGAACTTTTCAAAAAACAAGAAGTGGACTTCCTGATTGCAACTGATGTTGCTGCTCGTGGGATTGACATTGTTGGTGTTCGGACCGTAATAAATTTTGCTTGCCCACGAGATGTGAAAACATATCTTCATCGTGTTGGCCGCACAGCACGGGCAGGCAGAGAAGGATATGCTGTGACATTTGTAACAGATGATGATAGATCCCTCTTGAAAGCAATTGCAAAGAAAGCTGGTTCACAGTTGAAAAGCCGCATCGTTGCAGAGAAACCTGTGGCTGATTGTGCAAAACTGATTGAGCAACTAGAAGACCAAATTTCTACCATCATTCGAGAAGAAAGGGAGGAAATGTTAGTGAGGAAAGCTGAAATGGAACTTGCAAAGGTAGAAAATATGATGGCTCATAAGGACGATATATACTCACGGCCAAAGAAAACCTGGTTTACTACTGAAAGAGAAAAGAAGCTTTTGGCCAAGGCAGCTAAAGATTGTTTGGACCAAGGTAAGACCACCTCTGGAGTTATTAGTGCAAAACAAGCTGAAGAGCTCCGTCTGAAGGAGAAAAGGAGAAGAGAGAATGAGAAGAATTTACCTAGGAAGAAGCGCCGAAGATTAGAGGCACAGCGGGAGATGTTAGAAGGTGATGATGAAGATGATGAGGAAGCAAAGGAAAATAATAAAGGAGGGAAGAAGGCAAAGAAAGGCCAATCTGTAGTGGATGTGGCTTACCGTAAGGCCAAATCAATGAAGGCGACCATTAGACGCGGTCCTGGTGCGGGCAAAGGGAAGAATGAGAAGAATTCAAGACAACATTCTGAGAAGGCCCCGACTAGGCAGGAGGAAATGCATGATCTGTTCCAGAACGATATGAGTGAATGGAAACAGGGACGCGCCTTGAAGAAAAACAACGATTTTGCCCGCAAGAAATCCAAGAATGCTTTCAAGAGTAAAGCAAGGTACAAGCGCCGAAAGTAG
Protein:  
MDPSFRFDPDGSDDEAAAAPSARRKAAAQSPWEFSSYAESVAAEHARRRTTSIDEKISQLRQGRAKPVLSDDSESGSGEDDSDEEEVEGESGDEEDELEESEDEEEEVEGSGDEVEEEVEGSDEEEGGEVEGEEEGNEQGEEEEEGAHEEEDTAEQDGATGTVDPSKFFASSEGASFHANSFLELNLSRPLVRACEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPVLERLLFRPKRVPAIRVLILTPTRELAAQVHSMIEKLAQFTDIRCCLIVGGLSSKIQEVALRSMPDIVVATPGRIIDHVRNSLSVGLEDLAVVILDEADRLLELGFSAEIQELIRMCPKRRQTMLFSATMTEEIDELVKLSLNKPVRLEADPSLKRPATLTEEFVRIRRARESNQEAVLLALCLKTFKQSVIIFSGTKLSAHRLKIIFGLNGMKAAELHGNLTQAQRLEALELFKKQEVDFLIATDVAARGIDIVGVRTVINFACPRDVKTYLHRVGRTARAGREGYAVTFVTDDDRSLLKAIAKKAGSQLKSRIVAEKPVADCAKLIEQLEDQISTIIREEREEMLVRKAEMELAKVENMMAHKDDIYSRPKKTWFTTEREKKLLAKAAKDCLDQGKTTSGVISAKQAEELRLKEKRRRENEKNLPRKKRRRLEAQREMLEGDDEDDEEAKENNKGGKKAKKGQSVVDVAYRKAKSMKATIRRGPGAGKGKNEKNSRQHSEKAPTRQEEMHDLFQNDMSEWKQGRALKKNNDFARKKSKNAFKSKARYKRRK